Detailed information of Aala_g1126.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_030839582.1, uncharacterized protein LOC115923289 [Strongylocentrotus purpuratus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P09884DNA polymerase alpha catalytic subunit OS=Homo sapiens OX=9606 GN=POLA1 PE=1 SV=2
O89042DNA polymerase alpha catalytic subunit (Fragment) OS=Rattus norvegicus OX=10116 GN=Pola1 PE=1 SV=1
P33609DNA polymerase alpha catalytic subunit OS=Mus musculus OX=10090 GN=Pola1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyTHAP
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00136DNA_pol_BDNA polymerase family BFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF15613WSDWilliams-Beuren syndrome DDT (WSD), D-TOX E motifFamilyInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR006134DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan
IPR017964Conserved_siteDNA-directed DNA polymerase, family B, conserved siteInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR047174FamilyTyrosine-protein kinase BAZ1BInterproscan
IPR028941DomainWHIM2 domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR052229FamilyCollagen VI and Biomineralization Protein PIFInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR45861DNA POLYMERASE ALPHA CATALYTIC SUBUNITInterproscan
PTHR46802TYROSINE-PROTEIN KINASE BAZ1BInterproscan
PTHR33064POL PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22588UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003688Molecular FunctionDNA replication origin bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005658Cellular Componentalpha DNA polymerase:primase complexInterproscan
GO:0006272Biological Processleading strand elongationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:1902975Biological Processmitotic DNA replication initiationInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0035173Molecular Functionhistone kinase activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0090535Cellular ComponentWICH complexInterproscan
GO:0140801Molecular Functionhistone H2AXY142 kinase activityInterproscan

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