Genomic Location: :...
NR annotation: CAB4035833.1, RNA-dependent DNA polymerase, partial [Paramuricea clavata]
| CDS | |||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| Q9NBX4 | Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1 |
| P08548 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 |
| O00370 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | Domain | Interproscan |
| PF20209 | DUF6570 | Domain of unknown function (DUF6570) | Domain | Interproscan |
| PF03564 | DUF1759 | Protein of unknown function (DUF1759) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR002110 | Repeat | Ankyrin repeat | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR025724 | Domain | GAG-pre-integrase domain | Interproscan |
| IPR046700 | Domain | Domain of unknown function DUF6570 | Interproscan |
| IPR005312 | Family | Protein of unknown function DUF1759 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24198 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR19446 | REVERSE TRANSCRIPTASES | Interproscan |
| PTHR42648 | TRANSPOSASE, PUTATIVE-RELATED | Interproscan |
| PTHR46238 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR47331 | PHD-TYPE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00986 | ltrA; RNA-directed DNA polymerase | EC:2.7.7.49 | Enzymes with EC numbers | - | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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