Detailed information of Aala_g1134.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3104896.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
A4Z945Protein FAM200C OS=Bos taurus OX=9913 GN=FAM200C PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHTH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00100Zona_pellucidaZona pellucida-like domainFamilyInterproscan
PF13450NAD_binding_8NAD(P)-binding Rossmann-like domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF05225HTH_psqhelix-turn-helix, Psq domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR013289FamilyCBFA2T familyInterproscan
IPR000245FamilyV-ATPase proteolipid subunitInterproscan
IPR050735FamilyKininogen/Fetuin/Histidine-rich GlycoproteinInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR051982FamilyCiliary Assembly and Mitochondrial ImportInterproscan
IPR001507DomainZona pellucida domainInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR050281FamilyFlavin monoamine oxidase and related enzymesInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan
PTHR10379MTG8 ETO EIGHT TWENTY ONE PROTEINInterproscan
PTHR13814FETUINInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45984RNA (RNA) POLYMERASE II ASSOCIATED PROTEIN HOMOLOGInterproscan
PTHR10742FLAVIN MONOAMINE OXIDASEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0033179Cellular Componentproton-transporting V-type ATPase, V0 domainInterproscan
GO:0046961Molecular Functionproton-transporting ATPase activity, rotational mechanismInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0004866Molecular Functionendopeptidase inhibitor activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0010951Biological Processnegative regulation of endopeptidase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006626Biological Processprotein targeting to mitochondrionInterproscan
GO:0031072Molecular Functionheat shock protein bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

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