Gene detail

Detailed information of Aala_g1138.t1 in Alatina alata

Genomic Location: :...
NR annotation: KIH43640.1, hypothetical protein ANCDUO_26349, partial [Ancylostoma duodenale]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
P21328	RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03765	CRAL_TRIO_N	CRAL/TRIO, N-terminal domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011074	Domain	CRAL/TRIO, N-terminal domain	Interproscan
IPR036273	Homologous_superfamily	CRAL/TRIO, N-terminal domain superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR034393	Family	TatSF1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR45786	DNA BINDING PROTEIN-LIKE	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR15608	SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005684	Cellular Component	U2-type spliceosomal complex	Interproscan
GO:0005686	Cellular Component	U2 snRNP	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10356	MYO1; myosin I	-	Chromosome and associated proteins	ko03036	deepkoala
K10356	MYO1; myosin I	-	Exosome	ko04147	deepkoala