Detailed information of Aala_g115.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP4459908.1, hypothetical protein [Cytophagales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UPW0Forkhead box protein J3 OS=Homo sapiens OX=9606 GN=FOXJ3 PE=1 SV=2
Q8BUR3Forkhead box protein J3 OS=Mus musculus OX=10090 GN=Foxj3 PE=1 SV=1
Q28EM1Forkhead box protein J2 OS=Xenopus tropicalis OX=8364 GN=foxj2 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyFork_head

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00250ForkheadForkhead domainDomainInterproscan
PF20049DUF6451Domain of unknown function (DUF6451)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001766DomainFork head domainInterproscan
IPR030456Conserved_siteFork head domain conserved site 2Interproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045912FamilyForkhead box protein J2/3-likeInterproscan
IPR018122Conserved_siteFork head domain conserved site1Interproscan
IPR045609DomainDomain of unknown function DUF6451Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46078FORKHEAD BOX PROTEIN J2 FAMILY MEMBERInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR23139RNA-BINDING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000243Cellular Componentcommitment complexInterproscan
GO:0008187Molecular Functionpoly-pyrimidine tract bindingInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan
GO:0030628Molecular Functionpre-mRNA 3'-splice site bindingInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0089701Cellular ComponentU2AF complexInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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