Detailed information of Aala_g1156.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044171342.1, uncharacterized protein LOC122955656 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P92520Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12895ANAPC3Anaphase-promoting complex, cyclosome, subunit 3RepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF01248Ribosomal_L7AeRibosomal protein L7Ae/L30e/S12e/Gadd45 familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR004038DomainRibosomal protein eL8/eL30/eS12/Gadd45Interproscan
IPR040051FamilySelenocysteine insertion sequence-binding protein 2Interproscan
IPR029064Homologous_superfamilyRibosomal protein eL30-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46803E3 UBIQUITIN-PROTEIN LIGASE CHIPInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13284GH01354PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006515Biological Processprotein quality control for misfolded or incompletely synthesized proteinsInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0045862Biological Processpositive regulation of proteolysisInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071218Biological Processcellular response to misfolded proteinInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0035368Molecular Functionselenocysteine insertion sequence bindingInterproscan
GO:0043021Molecular Functionribonucleoprotein complex bindingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

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