Detailed information of Aala_g116.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3171535.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O75150E3 ubiquitin-protein ligase BRE1B OS=Homo sapiens OX=9606 GN=RNF40 PE=1 SV=5
Q5RAU7E3 ubiquitin-protein ligase BRE1B OS=Pongo abelii OX=9601 GN=RNF40 PE=2 SV=1
Q5VTR2E3 ubiquitin-protein ligase BRE1A OS=Homo sapiens OX=9606 GN=RNF20 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF00149MetallophosCalcineurin-like phosphoesteraseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052394FamilyLeucine-rich repeat-containing proteinInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR013956FamilyE3 ubiquitin ligase Bre1Interproscan
IPR001506DomainPeptidase M12AInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR052244FamilyHigh-affinity choline transporterInterproscan
IPR038377Homologous_superfamilySodium/glucose symporter superfamilyInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR051693FamilyUPF0046 metallophosphoesteraseInterproscan
IPR004843DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24114LEUCINE RICH REPEAT FAMILY PROTEINInterproscan
PTHR23163RING FINGER PROTEIN-RELATEDInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR45897HIGH-AFFINITY CHOLINE TRANSPORTER 1Interproscan
PTHR35846PROTEIN CBG05131Interproscan
PTHR45134-Interproscan
PTHR24289STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASEInterproscan
PTHR45632LD33804PInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12905METALLOPHOSPHOESTERASEInterproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0033503Cellular ComponentHULC complexInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071894Biological Processobsolete histone H2B conserved C-terminal lysine ubiquitinationInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005307Molecular Functioncholine:sodium symporter activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008292Biological Processacetylcholine biosynthetic processInterproscan
GO:0015871Biological Processcholine transportInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan

TOP