Detailed information of Aala_g1165.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP5013657.1, hypothetical protein [Ketobacter sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92752Tenascin-R OS=Homo sapiens OX=9606 GN=TNR PE=1 SV=3
Q05546Tenascin-R OS=Rattus norvegicus OX=10116 GN=Tnr PE=1 SV=1
Q8BYI9Tenascin-R OS=Mus musculus OX=10090 GN=Tnr PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00282Pyridoxal_deCPyridoxal-dependent decarboxylase conserved domainDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR014044DomainCAP domainInterproscan
IPR021115Binding_sitePyridoxal-phosphate binding siteInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR002129FamilyPyridoxal phosphate-dependent decarboxylaseInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45749-Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0016831Molecular Functioncarboxy-lyase activityInterproscan
GO:0016830Molecular Functioncarbon-carbon lyase activityInterproscan
GO:0019752Biological Processcarboxylic acid metabolic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16574MZT2A_B; mitotic-spindle organizing protein 2A/2B-Cytoskeleton proteinsko04812deepkoala

TOP