Detailed information of Aala_g1167.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4007264.1, MAM and LDL-receptor class A domain-containing 2-like, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8TE57A disintegrin and metalloproteinase with thrombospondin motifs 16 OS=Homo sapiens OX=9606 GN=ADAMTS16 PE=1 SV=3
Q05A36RNA-binding E3 ubiquitin-protein ligase MEX3C OS=Mus musculus OX=10090 GN=Mex3c PE=2 SV=2
Q5U5Q3RNA-binding E3 ubiquitin-protein ligase MEX3C OS=Homo sapiens OX=9606 GN=MEX3C PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF17172GST_N_4Glutathione S-transferase N-terminal domain DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF03828PAP_assocCid1 family poly A polymeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR012336DomainThioredoxin-like foldInterproscan
IPR040079FamilyGlutathione transferase familyInterproscan
IPR050931FamilyMitochondrial Protein Transport MetaxinInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR047226DomainRNA-binding protein MEX-3, second type I KH domainInterproscan
IPR004087DomainK Homology domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR047227FamilyRNA-binding protein MEX3Interproscan
IPR047228DomainRNA-binding protein MEX-3, first type I KH domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR002058DomainPAP/25A-associatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan
PTHR12289METAXIN RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR23285RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1Interproscan
PTHR12271POLY A POLYMERASE CID PAP -RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0031123Biological ProcessRNA 3'-end processingInterproscan
GO:0050265Molecular FunctionRNA uridylyltransferase activityInterproscan
GO:0071076Biological ProcessRNA 3' uridylationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15686MEX3, RKHD; RNA-binding protein MEX3EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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