Detailed information of Aala_g1185.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_042228056.1, zinc finger MYM-type protein 1-like [Homarus americanus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86YT6E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens OX=9606 GN=MIB1 PE=1 SV=1
Q6GNY1E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis OX=8355 GN=mib1 PE=2 SV=1
Q80SY4E3 ubiquitin-protein ligase MIB1 OS=Mus musculus OX=10090 GN=Mib1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan
PF03055RPE65Retinal pigment epithelial membrane proteinRepeatInterproscan
PF18346SH3_15Mind bomb SH3 repeat domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR006578DomainMADF domainInterproscan
IPR039353FamilyTranscription factor Adf-1Interproscan
IPR045243FamilymRNA 3'-end-processing protein Rna14-likeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR004294FamilyCarotenoid oxygenaseInterproscan
IPR040847DomainMind bomb, SH3 repeat domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12243MADF DOMAIN TRANSCRIPTION FACTORInterproscan
PTHR19980RNA CLEAVAGE STIMULATION FACTORInterproscan
PTHR10543BETA-CAROTENE DIOXYGENASEInterproscan
PTHR24202E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0031123Biological ProcessRNA 3'-end processingInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0003834Molecular Functionbeta-carotene 15,15'-dioxygenase activityInterproscan
GO:0004744Molecular Functionobsolete retinal isomerase activityInterproscan
GO:0010436Molecular Functioncarotenoid dioxygenase activityInterproscan
GO:0016121Biological Processcarotene catabolic processInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

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