Gene detail

Detailed information of Aala_g120.t1 in Alatina alata

Genomic Location: :...
NR annotation: KXJ19625.1, hypothetical protein AC249_AIPGENE7421 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
F1QFS9	Ubiquitin carboxyl-terminal hydrolase 13 OS=Danio rerio OX=7955 GN=usp13 PE=2 SV=1
P45974	Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sapiens OX=9606 GN=USP5 PE=1 SV=2
Q5R407	Ubiquitin carboxyl-terminal hydrolase 5 OS=Pongo abelii OX=9601 GN=UBP5 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF00109	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan
PF00698	Acyl_transf_1	Acyl transferase domain	Domain	Interproscan
PF02801	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan
PF16197	KAsynt_C_assoc	Ketoacyl-synthetase C-terminal extension	Family	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR020841	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR014030	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR014043	Domain	Acyl transferase	Interproscan
IPR018201	Active_site	Beta-ketoacyl synthase, active site	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR014031	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR032821	Domain	Polyketide synthase, C-terminal extension	Interproscan
IPR001227	Homologous_superfamily	Acyl transferase domain superfamily	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR000515	Domain	ABC transporter type 1, transmembrane domain MetI-like	Interproscan
IPR036866	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR050185	Family	Ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47272	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR43775	FATTY ACID SYNTHASE	Interproscan
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR23240	DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED	Interproscan
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan
PTHR22954	RETROVIRAL PROTEASE-RELATED	Interproscan
PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0004315	Molecular Function	3-oxoacyl-[acyl-carrier-protein] synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0006303	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0035312	Molecular Function	5'-3' DNA exonuclease activity	Interproscan
GO:0036297	Biological Process	interstrand cross-link repair	Interproscan
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan