Detailed information of Aala_g1202.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI0233892.1, hypothetical protein LSAT2_015862 [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR039938FamilyTranscription factor Sp4-likeInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005533DomainAMOP domainInterproscan
IPR003886DomainNIDO domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR051495FamilyEpithelial Barrier and Cell Signaling ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR14947ZINC FINGER PROTEINInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR15735FCH AND DOUBLE SH3 DOMAINS PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR13802MUCIN 4-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007274Biological Processneuromuscular synaptic transmissionInterproscan
GO:0030833Biological Processregulation of actin filament polymerizationInterproscan
GO:0031594Cellular Componentneuromuscular junctionInterproscan
GO:0055037Cellular Componentrecycling endosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

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