Gene detail

Detailed information of Aala_g1205.t1 in Alatina alata

Genomic Location: :...
NR annotation: RVE47418.1, hypothetical protein evm_007928 [Chilo suppressalis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B8CWS6	Peptide deformylase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=def PE=3 SV=1
Q67PR5	Peptide deformylase OS=Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T) OX=292459 GN=def PE=3 SV=1
B0TGS8	Peptide deformylase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) OX=498761 GN=def PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01327	Pep_deformylase	Polypeptide deformylase	Domain	Interproscan
PF00773	RNB	RNB domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00755	Carn_acyltransf	Choline/Carnitine o-acyltransferase	Family	Interproscan
PF00616	RasGAP	GTPase-activator protein for Ras-like GTPase	Family	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023635	Family	Peptide deformylase	Interproscan
IPR036821	Homologous_superfamily	Peptide deformylase superfamily	Interproscan
IPR001900	Domain	Ribonuclease II/R	Interproscan
IPR050180	Family	RNR Ribonuclease	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR022966	Conserved_site	Ribonuclease II/R, conserved site	Interproscan
IPR033053	Family	Histone transcription regulator 3/CABIN1	Interproscan
IPR042231	Homologous_superfamily	Choline/Carnitine o-acyltransferase, domain 2	Interproscan
IPR000542	Family	Acyltransferase ChoActase/COT/CPT	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR039551	Domain	Choline/carnitine acyltransferase domain	Interproscan
IPR001936	Domain	Ras GTPase-activating domain	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR051320	Family	Viral Replication and Maturation Polyprotein	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR037493	Family	Exodeoxyribonuclease III-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10458	PEPTIDE DEFORMYLASE	Interproscan
PTHR23355	RIBONUCLEASE	Interproscan
PTHR15502	CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR22589	CARNITINE O-ACYLTRANSFERASE	Interproscan
PTHR14149	RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF	Interproscan
PTHR33064	POL PROTEIN	Interproscan
PTHR43250	EXODEOXYRIBONUCLEASE III	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0042586	Molecular Function	peptide deformylase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0018206	Biological Process	peptidyl-methionine modification	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0000176	Cellular Component	nuclear exosome (RNase complex)	Interproscan
GO:0000177	Cellular Component	cytoplasmic exosome (RNase complex)	Interproscan
GO:0004519	Molecular Function	endonuclease activity	Interproscan
GO:0016075	Biological Process	rRNA catabolic process	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006325	Biological Process	chromatin organization	Interproscan
GO:0031491	Molecular Function	nucleosome binding	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0043087	Biological Process	regulation of GTPase activity	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:1903479	Biological Process	mitotic actomyosin contractile ring assembly actin filament organization	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0008311	Molecular Function	double-stranded DNA 3'-5' DNA exonuclease activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03834	tyrP; tyrosine-specific transport protein	-	Transporters	ko02000	deepkoala