Detailed information of Aala_g1206.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_012945625.1, uncharacterized protein LOC106013714 [Aplysia californica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02194PXAPXA domainFamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF14244Retrotran_gag_3gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR024862FamilyTransient receptor potential cation channel subfamily VInterproscan
IPR003114DomainPhox-associated domainInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR029472DomainRetrotransposon Copia-like, N-terminalInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINInterproscan
PTHR22775SORTING NEXINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR46601ULP_PROTEASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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