Detailed information of Aala_g1207.t1 in Alatina alata

Genomic Location: :...
NR annotation: VDI78348.1, Hypothetical predicted protein [Mytilus galloprovincialis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9V6L0Probable lysine-specific demethylase 4B OS=Drosophila melanogaster OX=7227 GN=Kdm4B PE=3 SV=3
O75164Lysine-specific demethylase 4A OS=Homo sapiens OX=9606 GN=KDM4A PE=1 SV=2
Q8BW72Lysine-specific demethylase 4A OS=Mus musculus OX=10090 GN=Kdm4a PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyMH1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF03165MH1MH1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR039188FamilyATPase family AAA domain-containing protein 3Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR023780DomainChromo domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR051219FamilyHeterochromatin-associated chromo domain-containing proteinInterproscan
IPR023298Homologous_superfamilyP-type ATPase, transmembrane domain superfamilyInterproscan
IPR003347DomainJmjC domainInterproscan
IPR052638FamilyPiggyBac transposable element-derivedInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013790FamilyDwarfinInterproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR013019DomainMAD homology, MH1Interproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23075PUTATIVE ATP-ASEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR22812CHROMOBOX PROTEINInterproscan
PTHR10694LYSINE-SPECIFIC DEMETHYLASEInterproscan
PTHR47055DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR24393ZINC FINGER PROTEINInterproscan
PTHR13703SMADInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005721Cellular Componentpericentric heterochromatinInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan
GO:0032454Molecular Functionhistone H3K9 demethylase activityInterproscan
GO:0051864Molecular Functionhistone H3K36 demethylase activityInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0030509Biological ProcessBMP signaling pathwayInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22643MRLN; myoregulin-Transportersko02000deepkoala

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