Detailed information of Aala_g1208.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002165851.1, uncharacterized protein LOC100198679 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q1LVK9NEDD4-binding protein 1 OS=Danio rerio OX=7955 GN=n4bp1 PE=2 SV=3
Q5DTV4Probable ribonuclease ZC3H12C OS=Mus musculus OX=10090 GN=Zc3h12c PE=1 SV=2
Q9C0D7Probable ribonuclease ZC3H12C OS=Homo sapiens OX=9606 GN=ZC3H12C PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03133TTLTubulin-tyrosine ligase familyFamilyInterproscan
PF18039UBA_6UBA-like domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004344FamilyTubulin-tyrosine ligase/Tubulin polyglutamylaseInterproscan
IPR053317FamilyTubulin polyglutamylaseInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR051101FamilyZC3H12/N4BP1 Ribonuclease and RegulatorInterproscan
IPR040546DomainRege-1, UBA-like domainInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR051166FamilyThreonine SynthaseInterproscan
IPR004450FamilyThreonine synthase-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47113LD09343PInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR12876N4BP1-RELATEDInterproscan
PTHR42690THREONINE SYNTHASE FAMILY MEMBERInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0036211Biological Processprotein modification processInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0036464Cellular Componentcytoplasmic ribonucleoprotein granuleInterproscan
GO:0090502Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009071Biological Processserine family amino acid catabolic processInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0046360Biological Process2-oxobutyrate biosynthetic processInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06037THNSL2; O-phospho-L-threonine phospho-lyaseEC:4.2.3.-
Transcription-deepkoala
Enzymes with EC numbers-deepkoala

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