Gene detail

Detailed information of Aala_g1216.t1 in Alatina alata

Genomic Location: :...
NR annotation: CDJ80345.1, endonuclease-reverse transcriptase [Haemonchus contortus]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O02751	Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8	Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
P27393	Collagen alpha-2(IV) chain OS=Ascaris suum OX=6253 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01413	C4	C-terminal tandem repeated domain in type 4 procollagen	Domain	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001442	Domain	Collagen IV, non-collagenous	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR036954	Homologous_superfamily	Collagen IV, non-collagenous domain superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan
GO:0005581	Cellular Component	collagen trimer	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02954	RP-S14, MRPS14, rpsN; small subunit ribosomal protein S14	-	Ribosome	ko03011	deepkoala