Gene detail

Detailed information of Aala_g1223.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047145862.1, 227 kDa spindle- and centromere-associated protein isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q9ZT94	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1
Q94HW2	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	PC4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10479	BLTP1_C	Bridge-like lipid transfer protein family member 1, C-terminal	Repeat	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF13976	gag_pre-integrs	GAG-pre-integrase domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF05585	DUF1758	Putative peptidase (DUF1758)	Family	Interproscan
PF00787	PX	PX domain	Domain	Interproscan
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF02229	PC4	Transcriptional Coactivator p15 (PC4)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR018863	Domain	Bridge-like lipid transfer protein family member 1, C-terminal	Interproscan
IPR033616	Family	Bridge-like lipid transfer protein family member 1	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR025724	Domain	GAG-pre-integrase domain	Interproscan
IPR008737	Domain	Peptidase aspartic, putative	Interproscan
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR001683	Domain	Phox homology	Interproscan
IPR051837	Family	Sorting Nexin/PX Domain-Containing Protein Kinase-Like	Interproscan
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan
IPR003173	Domain	Transcriptional coactivator p15 (PC4), C-terminal	Interproscan
IPR009044	Homologous_superfamily	ssDNA-binding transcriptional regulator	Interproscan
IPR045125	Family	RNA polymerase II transcriptional coactivator Sub1/Tcp4-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR31640	TRANSMEMBRANE PROTEIN KIAA1109	Interproscan
PTHR33198	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR22999	PX SERINE/THREONINE KINASE PXK	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR13215	RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0048488	Biological Process	synaptic vesicle endocytosis	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005769	Cellular Component	early endosome	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0006622	Biological Process	protein targeting to lysosome	Interproscan
GO:0008333	Biological Process	endosome to lysosome transport	Interproscan
GO:0031313	Cellular Component	extrinsic component of endosome membrane	Interproscan
GO:0045022	Biological Process	early endosome to late endosome transport	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0060261	Biological Process	positive regulation of transcription initiation by RNA polymerase II	Interproscan