Detailed information of Aala_g1250.t1 in Alatina alata

Genomic Location: :...
NR annotation: PFX26639.1, Dynein heavy chain 8, axonemal [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M0R8U1Dynein axonemal heavy chain 5 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dnah5 PE=1 SV=1
Q8VHE6Dynein axonemal heavy chain 5 OS=Mus musculus OX=10090 GN=Dnah5 PE=1 SV=2
Q8TE73Dynein axonemal heavy chain 5 OS=Homo sapiens OX=9606 GN=DNAH5 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF04991LicDLicD familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF08385DHC_N1Dynein heavy chain, N-terminal region 1FamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF01044VinculinVinculin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052613FamilyLicD transferaseInterproscan
IPR007074FamilyLicD familyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013594DomainDynein heavy chain, tailInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR017997FamilyVinculinInterproscan
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR006077FamilyVinculin/alpha-cateninInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13627FUKUTIN RELATED PROTEINInterproscan
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46532MALE FERTILITY FACTOR KL5Interproscan
PTHR19303TRANSPOSONInterproscan
PTHR46180VINCULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005858Cellular Componentaxonemal dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0008013Molecular Functionbeta-catenin bindingInterproscan
GO:0044291Cellular Componentcell-cell contact zoneInterproscan
GO:0045294Molecular Functionalpha-catenin bindingInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11302HMGN4; high-mobility group nucleosome-binding domain-containing protein 4-Chromosome and associated proteinsko03036deepkoala

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