Detailed information of Aala_g1252.t1 in Alatina alata

Genomic Location: :...
NR annotation: GBM03662.1, hypothetical protein AVEN_134896-1 [Araneus ventricosus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF02944BESSBESS motifMotifInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR038441Homologous_superfamilyTHAP-type zinc finger superfamilyInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR006578DomainMADF domainInterproscan
IPR004210DomainBESS motifInterproscan
IPR039353FamilyTranscription factor Adf-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR33327ENDONUCLEASEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR45749-Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12243MADF DOMAIN TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02221yggT; YggT family protein-Secretion systemko02044deepkoala

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