Detailed information of Aala_g1260.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCH9665805.1, hypothetical protein [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9CSH3Exosome complex exonuclease RRP44 OS=Mus musculus OX=10090 GN=Dis3 PE=1 SV=4
Q9Y2L1Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN=DIS3 PE=1 SV=2
Q9SHL7Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana OX=3702 GN=RRP44A PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF17215Rrp44_S1S1 domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR033770DomainExosome complex exonuclease RRP44, S1 domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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