Detailed information of Aala_g1269.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3018156.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q94981E3 ubiquitin-protein ligase ariadne-1 OS=Drosophila melanogaster OX=7227 GN=ari-1 PE=1 SV=2
Q32NS4E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis OX=8355 GN=arih1 PE=2 SV=1
B1H1E4E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis OX=8364 GN=arih1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029510Conserved_siteAldehyde dehydrogenase, glutamic acid active siteInterproscan
IPR016162Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR002052Conserved_siteDNA methylase, N-6 adenine-specific, conserved siteInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR050590FamilyExosome complex component Rrp42 subfamilyInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR34615PX DOMAIN-CONTAINING PROTEINInterproscan
PTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINInterproscan
PTHR35711EXPRESSED PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0000467Biological Processexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan
GO:0017091Molecular FunctionmRNA 3'-UTR AU-rich region bindingInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0034473Biological ProcessU1 snRNA 3'-end processingInterproscan
GO:0034475Biological ProcessU4 snRNA 3'-end processingInterproscan
GO:0034476Biological ProcessU5 snRNA 3'-end processingInterproscan
GO:0043928Biological Processobsolete exonucleolytic catabolism of deadenylated mRNAInterproscan
GO:0071028Biological Processnuclear mRNA surveillanceInterproscan
GO:0071035Biological Processnuclear polyadenylation-dependent rRNA catabolic processInterproscan
GO:0071038Biological ProcessTRAMP-dependent tRNA surveillance pathwayInterproscan
GO:0071042Biological Processnuclear polyadenylation-dependent mRNA catabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12394AP1S1_2; AP-1 complex subunit sigma 1/2-Membrane traffickingko04131deepkoala

TOP