Detailed information of Aala_g127.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_017272617.1, beta-carotene 15, 15-dioxygenase 2, like [Kryptolebias marmoratus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8HXG8Carotenoid-cleaving dioxygenase, mitochondrial OS=Macaca fascicularis OX=9541 GN=BCO2 PE=2 SV=2
Q99NF1Carotenoid-cleaving dioxygenase, mitochondrial OS=Mus musculus OX=10090 GN=Bco2 PE=1 SV=1
Q5RF16Carotenoid-cleaving dioxygenase, mitochondrial OS=Pongo abelii OX=9601 GN=BCO2 PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan
PF00202Aminotran_3Aminotransferase class-IIIDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF03055RPE65Retinal pigment epithelial membrane proteinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR005814FamilyAminotransferase class-IIIInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR044926Homologous_superfamilyRGS, subdomain 2Interproscan
IPR036305Homologous_superfamilyRGS domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR004294FamilyCarotenoid oxygenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR43206AMINOTRANSFERASEInterproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10543BETA-CAROTENE DIOXYGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008483Molecular Functiontransaminase activityInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0003867Molecular Functionobsolete 4-aminobutyrate transaminase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0009450Biological Processgamma-aminobutyric acid catabolic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0003834Molecular Functionbeta-carotene 15,15'-dioxygenase activityInterproscan
GO:0004744Molecular Functionobsolete retinal isomerase activityInterproscan
GO:0010436Molecular Functioncarotenoid dioxygenase activityInterproscan
GO:0016121Biological Processcarotene catabolic processInterproscan

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