Detailed information of Aala_g1273.t1 in Alatina alata

Genomic Location: :...
NR annotation: PGH37178.1, MAG: hypothetical protein CRN43_22725, partial [Candidatus Nephrothrix sp. EaCA]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P0CV72Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF18972WheelCns1/TTC4 Wheel domainDomainInterproscan
PF14893PNMAPNMAFamilyInterproscan
PF13894zf-C2H2_4C2H2-type zinc fingerDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan
PF04434SWIMSWIM zinc fingerDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF02188GoLocoGoLoco motifMotifInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR044059DomainCns1/TTC4, wheel domainInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR051703FamilyNF-kappa-B Signaling RegulatorInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR052386FamilyG-protein-signaling modulatorInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR003109Conserved_siteGoLoco motifInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46035TETRATRICOPEPTIDE REPEAT PROTEIN 4Interproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR24399ZINC FINGER AND BTB DOMAIN-CONTAININGInterproscan
PTHR46609EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR45749-Interproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45954LD33695PInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0030544Molecular FunctionHsp70 protein bindingInterproscan
GO:0051879Molecular FunctionHsp90 protein bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001227Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0000132Biological Processestablishment of mitotic spindle orientationInterproscan
GO:0001965Molecular FunctionG-protein alpha-subunit bindingInterproscan
GO:0005092Molecular FunctionGDP-dissociation inhibitor activityInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030695Molecular FunctionGTPase regulator activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09228KRAB; KRAB domain-containing zinc finger protein-Transcription factorsko03000deepkoala

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