Gene detail

Detailed information of Aala_g1278.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044174604.1, uncharacterized protein LOC122958137 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q03274	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan
PF00013	KH_1	KH domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR047367	Domain	A-kinase anchor protein 1, Tudor domain	Interproscan
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan
IPR050621	Family	Tudor domain-containing	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR000305	Domain	GIY-YIG endonuclease	Interproscan
IPR035901	Homologous_superfamily	GIY-YIG endonuclease superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR22948	TUDOR DOMAIN CONTAINING PROTEIN	Interproscan
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11039	hld; delta-hemolysin	-	Bacterial toxins	ko02042	deepkoala