Detailed information of Aala_g1286.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAF2134587.1, unnamed protein product [Rotaria magnacalcarata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR053134FamilyRNA-directed DNA polymerase homologInterproscan
IPR023334DomainREKLES domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR15000ERYTHROID DIFFERENTIATION-RELATED FACTOR 1Interproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINInterproscan
PTHR21669CAPZ-INTERACTING PROTEIN AND RELATED PROTEINSInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006336Biological Processchromatin organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12646RIGI, DDX58; ATP-dependent RNA helicase DDX58EC:5.6.2.6
Pattern recognition receptorsko04054deepkoala

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