Detailed information of Aala_g1299.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_037804046.1, craniofacial development protein 2-like [Penaeus monodon]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q40302Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
P05419Neo-calmodulin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF01974tRNA_int_endotRNA intron endonuclease, catalytic C-terminal domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR052662FamilyRegulatory domain-containing proteinInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR038932FamilyPCNA-interacting partnerInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR050145FamilyCalmodulin and Centrin Calcium-Binding FamiliesInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR016690FamilytRNA-splicing endonuclease, SEN34 subunitInterproscan
IPR006677DomaintRNA intron endonuclease, catalytic domain-likeInterproscan
IPR011856Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan
IPR036167Homologous_superfamilytRNA intron endonuclease, catalytic domain-like superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR42264EPHRIN_REC_LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR32121PCNA-INTERACTING PARTNERInterproscan
PTHR23050CALCIUM BINDING PROTEINInterproscan
PTHR13070TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:2000042Biological Processnegative regulation of double-strand break repair via homologous recombinationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0000213Molecular FunctiontRNA-intron endonuclease activityInterproscan
GO:0000214Cellular ComponenttRNA-intron endonuclease complexInterproscan
GO:0000379Biological ProcesstRNA-type intron splice site recognition and cleavageInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15323TSEN34; tRNA-splicing endonuclease subunit Sen34EC:4.6.1.16
Exosomeko04147deepkoala
Transcription factorsko03000deepkoala
Transfer RNA biogenesisko03016deepkoala

TOP