Genomic Location: :...
NR annotation: CAB3993665.1, zinc finger MYM-type 1 [Paramuricea clavata]
| CDS | ||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| Q03278 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR051714 | Family | CCHC-type Zinc Finger Nucleic Acid Binding | Interproscan |
| IPR050972 | Family | Serine-aspartate repeat-containing protein | Interproscan |
| IPR053713 | Homologous_superfamily | Bacterial Outer Membrane Channel Superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19446 | REVERSE TRANSCRIPTASES | Interproscan |
| PTHR23002 | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | Interproscan |
| PTHR34403 | TOL-PAL SYSTEM PROTEIN TOLA | Interproscan |
| PTHR33223 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR21301 | REVERSE TRANSCRIPTASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0003727 | Molecular Function | single-stranded RNA binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0045182 | Molecular Function | translation regulator activity | Interproscan |
| GO:2000767 | Biological Process | positive regulation of cytoplasmic translation | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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