Detailed information of Aala_g1311.t1 in Alatina alata

Genomic Location: :...
NR annotation: PHR00840.1, hypothetical protein COB32_11720 [Halomonas sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF20416UTP20_CU3 small nucleolar RNA-associated protein 20, C-terminalDomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan
PF02274ADIArginine deiminaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR052575FamilySmall subunit processome component 20Interproscan
IPR046523DomainU3 small nucleolar RNA-associated protein 20, C-terminalInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR033199FamilyDimethylarginine dimethylaminohydrolase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR17695UNCHARACTERIZEDInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR12737DIMETHYLARGININE DIMETHYLAMINOHYDROLASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR35362ANK_REP_REGION DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000052Biological Processcitrulline metabolic processInterproscan
GO:0006525Biological Processarginine metabolic processInterproscan
GO:0016403Molecular Functiondimethylargininase activityInterproscan
GO:0016597Molecular Functionamino acid bindingInterproscan
GO:0045429Biological Processpositive regulation of nitric oxide biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01482DDAH, ddaH; dimethylargininaseEC:3.5.3.18
Exosomeko04147deepkoala

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