Detailed information of Aala_g1336.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_041460826.1, uncharacterized protein K02A2.6-like [Lytechinus variegatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10401Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04775Bile_Hydr_TransAcyl-CoA thioester hydrolase/BAAT N-terminal regionFamilyInterproscan
PF18658zf-C2H2_12Spin-doc zinc-fingerDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF12627PolyA_pol_RNAbdProbable RNA and SrmB- binding site of polymerase ADomainInterproscan
PF01743PolyA_polPoly A polymerase head domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042490Homologous_superfamilyAcyl-CoA thioester hydrolase/BAAT, N-terminalInterproscan
IPR006862DomainAcyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferaseInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR040647DomainSPIN-DOC-like, zinc-fingerInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR017984DomainChromo domain subgroupInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR023780DomainChromo domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR051219FamilyHeterochromatin-associated chromo domain-containing proteinInterproscan
IPR044251FamilyChromo domain-containing protein LHP1Interproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR002646DomainPoly A polymerase, head domainInterproscan
IPR032828DomaintRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domainInterproscan
IPR050264FamilyBacterial CCA-adding enzyme type 3 subfamilyInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45615MYOSIN HEAVY CHAIN, NON-MUSCLEInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10824ACYL-COENZYME A THIOESTERASE-RELATEDInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22812CHROMOBOX PROTEINInterproscan
PTHR47240CHROMO DOMAIN-CONTAINING PROTEIN LHP1Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR46173CCA TRNA NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000146Molecular Functionmicrofilament motor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016460Cellular Componentmyosin II complexInterproscan
GO:0032982Cellular Componentmyosin filamentInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0006631Biological Processfatty acid metabolic processInterproscan
GO:0006637Biological Processacyl-CoA metabolic processInterproscan
GO:0047617Molecular Functionfatty acyl-CoA hydrolase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005721Cellular Componentpericentric heterochromatinInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan
GO:0031507Biological Processheterochromatin formationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0001680Biological ProcesstRNA 3'-terminal CCA additionInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:1990180Biological Processmitochondrial tRNA 3'-end processingInterproscan

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