Detailed information of Aala_g134.t1 in Alatina alata

Genomic Location: :...
NR annotation: NXE44653.1, CDK7 kinase [Casuarius casuarius]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P50613Cyclin-dependent kinase 7 OS=Homo sapiens OX=9606 GN=CDK7 PE=1 SV=1
P20911Cyclin-dependent kinase 7 OS=Xenopus laevis OX=8355 GN=cdk7 PE=1 SV=1
Q03147Cyclin-dependent kinase 7 OS=Mus musculus OX=10090 GN=Cdk7 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00650CRAL_TRIOCRAL/TRIO domainDomainInterproscan
PF01490Aa_transTransmembrane amino acid transporter proteinFamilyInterproscan
PF02137A_deaminAdenosine-deaminase (editase) domainFamilyInterproscan
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009038DomainGOLD domainInterproscan
IPR036865Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR001251DomainCRAL-TRIO lipid binding domainInterproscan
IPR036598Homologous_superfamilyGOLD domain superfamilyInterproscan
IPR051064FamilySEC14-like and CRAL-TRIO domain-containing proteinInterproscan
IPR013057DomainAmino acid transporter, transmembrane domainInterproscan
IPR039041FamilyNav/unc-53 familyInterproscan
IPR002466DomainAdenosine deaminase/editaseInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR000409DomainBEACH domainInterproscan
IPR050865FamilyBEACH Domain-ContainingInterproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR038959FamilyPre-mRNA-processing factor 19Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050108FamilyCyclin-dependent kinaseInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23324SEC14 RELATED PROTEINInterproscan
PTHR22950AMINO ACID TRANSPORTERInterproscan
PTHR12784STEERINInterproscan
PTHR10910EUKARYOTE SPECIFIC DSRNA BINDING PROTEINInterproscan
PTHR46601ULP_PROTEASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13743BEIGE/BEACH-RELATEDInterproscan
PTHR43995PRE-MRNA-PROCESSING FACTOR 19Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24056CELL DIVISION PROTEIN KINASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0015179Molecular FunctionL-amino acid transmembrane transporter activityInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0022008Biological ProcessneurogenesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004000Molecular Functionadenosine deaminase activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003726Molecular Functiondouble-stranded RNA adenosine deaminase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006382Biological Processadenosine to inosine editingInterproscan
GO:0008251Molecular FunctiontRNA-specific adenosine deaminase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071006Cellular ComponentU2-type catalytic step 1 spliceosomeInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0004693Molecular Functioncyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0008353Molecular FunctionRNA polymerase II CTD heptapeptide repeat kinase activityInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan
GO:0070985Cellular Componenttranscription factor TFIIK complexInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan

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