Detailed information of Aala_g1340.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_019930369.2, fibrinogen-like protein A isoform X1 [Crassostrea gigas]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70165Ficolin-1 OS=Mus musculus OX=10090 GN=Fcn1 PE=1 SV=1
Q9WTS8Ficolin-1 OS=Rattus norvegicus OX=10116 GN=Fcn1 PE=2 SV=2
P19477Fibrinogen-like protein A OS=Apostichopus parvimensis OX=1902835 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF18043T4_Rnl2_CT4 RNA ligase 2 C-terminalDomainInterproscan
PF16769MCM3AP_GANPMCM3AP domain of GANPFamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00071RasRas familyDomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF21530Pif1_2B_domDNA helicase Pif1, 2B domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF09587PGA_capBacterial capsule synthesis protein PGA_capDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR041948Homologous_superfamilyRNA ligase 1/2, C-terminal domain superfamilyInterproscan
IPR040609DomainRNA ligase 2, C-terminalInterproscan
IPR031907DomainGerminal-centre associated nuclear protein, MCM3AP domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR051065FamilyRas-related small GTPaseInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR049163DomainDNA helicase Pif1-like, 2B domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR052169FamilyCell Wall Biosynthesis Accessory ProteinInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR019079DomainCapsule synthesis protein, CapAInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45704RAS-LIKE FAMILY MEMBER 11Interproscan
PTHR23274DNA HELICASE-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR33393POLYGLUTAMINE SYNTHESIS ACCESSORY PROTEIN RV0574C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0005657Cellular Componentreplication forkInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23847HPCAL1; hippocalcin-like protein 1-Signaling proteins-deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

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