Gene detail

Detailed information of Aala_g1342.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_022251072.1, GTP-binding protein Di-Ras2-like [Limulus polyphemus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q948K8	Ras-related protein RABG3a OS=Arabidopsis thaliana OX=3702 GN=RABG3A PE=2 SV=1
P31584	GTP-binding protein yptV1 OS=Volvox carteri OX=3067 GN=YPTV1 PE=3 SV=1
Q39571	GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF00071	Ras	Ras family	Domain	Interproscan
PF00579	tRNA-synt_1b	tRNA synthetases class I (W and Y)	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR052717	Family	Vacuolar processing and transposase activity regulators	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR052236	Family	Small GTPase RasD	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR002305	Family	Aminoacyl-tRNA synthetase, class Ic	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR039373	Family	Transferrin receptor protein 1/Glutamate carboxypeptidase 2-like	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR046450	Homologous_superfamily	PA domain superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR012317	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR46169	DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A	Interproscan
PTHR46149	MIP08469P	Interproscan
PTHR45786	DNA BINDING PROTEIN-LIKE	Interproscan
PTHR10055	TRYPTOPHANYL-TRNA SYNTHETASE	Interproscan
PTHR10404	N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE	Interproscan
PTHR47968	CENTROMERE PROTEIN E	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0004830	Molecular Function	tryptophan-tRNA ligase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006436	Biological Process	tryptophanyl-tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0004180	Molecular Function	carboxypeptidase activity	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24637	ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1)	EC:2.3.2.-	Ubiquitin system	ko04121	deepkoala