Detailed information of Aala_g1347.t1 in Alatina alata

Genomic Location: :...
NR annotation: EDO42102.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49582Neuronal acetylcholine receptor subunit alpha-7 OS=Mus musculus OX=10090 GN=Chrna7 PE=1 SV=1
Q05941Neuronal acetylcholine receptor subunit alpha-7 OS=Rattus norvegicus OX=10116 GN=Chrna7 PE=1 SV=2
Q494W8CHRNA7-FAM7A fusion protein OS=Homo sapiens OX=9606 GN=CHRFAM7A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00044Gp_dh_NGlyceraldehyde 3-phosphate dehydrogenase, NAD binding domainDomainInterproscan
PF02800Gp_dh_CGlyceraldehyde 3-phosphate dehydrogenase, C-terminal domainDomainInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051235FamilyCentrosomal Protein 152/SHC-Transforming ProteinInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR034132DomainRetropepsin Saci-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR027165FamilyCondensin complex subunit 3Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR020831FamilyGlyceraldehyde/Erythrose phosphate dehydrogenase familyInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR020830Active_siteGlyceraldehyde 3-phosphate dehydrogenase, active siteInterproscan
IPR020828DomainGlyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainInterproscan
IPR020829DomainGlyceraldehyde 3-phosphate dehydrogenase, catalytic domainInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR040111FamilyOuter dynein arm-docking complex subunit 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10337SHC TRANSFORMING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14418CONDENSIN COMPLEX SUBUNIT 3-RELATEDInterproscan
PTHR10836GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASEInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23040UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0007099Biological Processcentriole replicationInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000793Cellular Componentcondensed chromosomeInterproscan
GO:0000796Cellular Componentcondensin complexInterproscan
GO:0007076Biological Processmitotic chromosome condensationInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0004365Molecular Functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006096Biological Processglycolytic processInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K27179ODAD5, CLXN, EFCAB1; outer dynein arm-docking complex subunit 5-Exosomeko04147deepkoala
Cilium and associated proteinsko03037deepkoala

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