Gene detail

Detailed information of Aala_g1352.t1 in Alatina alata

Genomic Location: :...
NR annotation: PFX25870.1, hypothetical protein AWC38_SpisGene9493 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P04146	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P92519	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF01490	Aa_trans	Transmembrane amino acid transporter protein	Family	Interproscan
PF00679	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF03764	EFG_IV	Elongation factor G, domain IV	Domain	Interproscan
PF00287	Na_K-ATPase	Sodium / potassium ATPase beta chain	Family	Interproscan
PF20049	DUF6451	Domain of unknown function (DUF6451)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR013057	Domain	Amino acid transporter, transmembrane domain	Interproscan
IPR000640	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR005517	Domain	Translation elongation factor EFG/EF2, domain IV	Interproscan
IPR035647	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR038702	Homologous_superfamily	Sodium/potassium-transporting ATPase subunit beta superfamily	Interproscan
IPR000402	Family	Sodium/potassium-transporting ATPase subunit beta	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan
IPR045609	Domain	Domain of unknown function DUF6451	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR22950	AMINO ACID TRANSPORTER	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR42908	TRANSLATION ELONGATION FACTOR-RELATED	Interproscan
PTHR11523	SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT	Interproscan
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0003333	Biological Process	amino acid transmembrane transport	Interproscan
GO:0005774	Cellular Component	vacuolar membrane	Interproscan
GO:0015179	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006414	Biological Process	translational elongation	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0001671	Molecular Function	ATPase activator activity	Interproscan
GO:0005890	Cellular Component	sodium:potassium-exchanging ATPase complex	Interproscan
GO:0006813	Biological Process	potassium ion transport	Interproscan
GO:0006814	Biological Process	sodium ion transport	Interproscan
GO:0006883	Biological Process	intracellular sodium ion homeostasis	Interproscan
GO:0030007	Biological Process	intracellular potassium ion homeostasis	Interproscan
GO:0036376	Biological Process	sodium ion export across plasma membrane	Interproscan
GO:1990573	Biological Process	potassium ion import across plasma membrane	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan