Detailed information of Aala_g1354.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_031550662.1, titin-like isoform X9 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10401Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P0CT41Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR050971FamilyCadherin domain-containing proteinInterproscan
IPR003545FamilyTelomerase reverse transcriptaseInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR000366FamilyGPCR fungal pheromone mating factor, STE2Interproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR051129FamilyCalcium/calmodulin-dependent serine/threonine kinaseInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24025DESMOGLEIN FAMILY MEMBERInterproscan
PTHR46601ULP_PROTEASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12066TELOMERASE REVERSE TRANSCRIPTASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45749-Interproscan
PTHR47633IMMUNOGLOBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0000333Cellular Componenttelomerase catalytic core complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003721Molecular Functionobsolete telomerase RNA reverse transcriptase activityInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0070034Molecular Functiontelomerase RNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004932Molecular Functionmating-type factor pheromone receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02535lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylaseEC:3.5.1.108
Lipopolysaccharide biosynthesis proteinsko01005deepkoala

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