Detailed information of Aala_g1374.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ7316174.1, hypothetical protein JRQ81_002336 [Phrynocephalus forsythii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9HCS7Pre-mRNA-splicing factor SYF1 OS=Homo sapiens OX=9606 GN=XAB2 PE=1 SV=2
Q9DCD2Pre-mRNA-splicing factor SYF1 OS=Mus musculus OX=10090 GN=Xab2 PE=1 SV=1
Q99PK0Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus OX=10116 GN=Xab2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF05770Ins134_P3_kinInositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domainDomainInterproscan
PF17927Ins134_P3_kin_NInositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domainDomainInterproscan
PF00117GATaseGlutamine amidotransferase class-IDomainInterproscan
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan
PF08797HIRANHIRAN domainDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045075FamilyPre-mRNA-splicing factor Syf1-likeInterproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008656FamilyInositol-tetrakisphosphate 1-kinaseInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR040464DomainInositol 1,3,4-trisphosphate 5/6-kinase, ATP-grasp domainInterproscan
IPR041429DomainInositol-tetrakisphosphate 1-kinase, N-terminalInterproscan
IPR017926DomainGlutamine amidotransferaseInterproscan
IPR029062Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR014905DomainHIRAN domainInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11246PRE-MRNA SPLICING FACTORInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR14217INOSITOL-TETRAKISPHOSPHATE 1-KINASEInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43686SULFURTRANSFERASE-RELATEDInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000349Biological Processgeneration of catalytic spliceosome for first transesterification stepInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0071014Cellular Componentpost-mRNA release spliceosomal complexInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032957Biological Processinositol trisphosphate metabolic processInterproscan
GO:0047325Molecular Functioninositol-3,4,5,6-tetrakisphosphate 1-kinase activityInterproscan
GO:0052725Molecular Functioninositol-1,3,4-trisphosphate 6-kinase activityInterproscan
GO:0052726Molecular Functioninositol-1,3,4-trisphosphate 5-kinase activityInterproscan
GO:0052746Biological Processobsolete inositol phosphorylationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016818Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00913ITPK1; inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinaseEC:2.7.1.159
EC:2.7.1.134
Mitochondrial biogenesisko03029deepkoala
Phosphatidylinositol signaling systemko04070deepkoala

TOP