Detailed information of Aala_g1375.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028417008.1, uncharacterized protein K02A2.6-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9HCS7Pre-mRNA-splicing factor SYF1 OS=Homo sapiens OX=9606 GN=XAB2 PE=1 SV=2
Q9DCD2Pre-mRNA-splicing factor SYF1 OS=Mus musculus OX=10090 GN=Xab2 PE=1 SV=1
Q99PK0Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus OX=10116 GN=Xab2 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03645Tctex-1Tctex-1 familyFamilyInterproscan
PF0024414-3-314-3-3 proteinRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF00837T4_deiodinaseIodothyronine deiodinaseFamilyInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF06979TMEM70TMEM70/TMEM186/TMEM223 protein familyFamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF01153GlypicanGlypicanFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038586Homologous_superfamilyTctex-1-like superfamilyInterproscan
IPR005334FamilyDynein light chain Tctex-1 likeInterproscan
IPR023410Domain14-3-3 domainInterproscan
IPR036815Homologous_superfamily14-3-3 domain superfamilyInterproscan
IPR000308Family14-3-3 proteinInterproscan
IPR023409Conserved_site14-3-3 protein, conserved siteInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR045075FamilyPre-mRNA-splicing factor Syf1-likeInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR050774FamilyKCMF1 and DystrophinInterproscan
IPR000643FamilyIodothyronine deiodinaseInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR026571FamilyTransmembrane protein 186Interproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR045325FamilyTMEM70/TMEM186/TMEM223 protein familyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050359FamilyBasic helix-loop-helix transcription factorsInterproscan
IPR001863FamilyGlypicanInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR21255T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAINInterproscan
PTHR1886014-3-3 PROTEINInterproscan
PTHR11246PRE-MRNA SPLICING FACTORInterproscan
PTHR12268E3 UBIQUITIN-PROTEIN LIGASE KCMF1Interproscan
PTHR11781IODOTHYRONINE DEIODINASEInterproscan
PTHR13603UNCHARACTERIZEDInterproscan
PTHR19290BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005868Cellular Componentcytoplasmic dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0034613Biological Processprotein localizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000349Biological Processgeneration of catalytic spliceosome for first transesterification stepInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0071014Cellular Componentpost-mRNA release spliceosomal complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0099536Biological Processsynaptic signalingInterproscan
GO:0004800Molecular Functionthyroxine 5'-deiodinase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0009966Biological Processregulation of signal transductionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22866TCTEX1D2; tctex1 domain-containing protein 2-Exosomeko04147deepkoala
Cilium and associated proteinsko03037deepkoala

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