Genomic Location: :...
NR annotation: XP_041915329.1, uncharacterized protein LOC121680177 [Alosa sapidissima]
| CDS | ||||
| Transcript |
| Protein |
| Uniprot term | Description | |||
|---|---|---|---|---|
| P34457 | Putative uncharacterized transposon-derived protein F54H12.3 OS=Caenorhabditis elegans OX=6239 GN=F54H12.3 PE=5 SV=1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-C2H2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| PF12874 | zf-met | Zinc-finger of C2H2 type | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF00385 | Chromo | Chromo (CHRromatin Organisation MOdifier) domain | Domain | Interproscan |
| PF13966 | zf-RVT | zinc-binding in reverse transcriptase | Domain | Interproscan |
| PF13843 | DDE_Tnp_1_7 | Transposase IS4 | Domain | Interproscan |
| PF13499 | EF-hand_7 | EF-hand domain pair | Domain | Interproscan |
| PF10545 | MADF_DNA_bdg | Alcohol dehydrogenase transcription factor Myb/SANT-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR000953 | Domain | Chromo/chromo shadow domain | Interproscan |
| IPR023779 | Conserved_site | Chromo domain, conserved site | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR023780 | Domain | Chromo domain | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR016197 | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR026960 | Domain | Reverse transcriptase zinc-binding domain | Interproscan |
| IPR001036 | Family | Acriflavin resistance protein | Interproscan |
| IPR029526 | Domain | PiggyBac transposable element-derived protein | Interproscan |
| IPR002048 | Domain | EF-hand domain | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR011992 | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR006578 | Domain | MADF domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47027 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR46585 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN | Interproscan |
| PTHR35450 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR11319 | G PROTEIN-COUPLED RECEPTOR-RELATED | Interproscan |
| PTHR46599 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 | Interproscan |
| PTHR46238 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0022857 | Molecular Function | transmembrane transporter activity | Interproscan |
| GO:0055085 | Biological Process | transmembrane transport | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
© 2026 All Rights Reserved.
