Detailed information of Aala_g1394.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_037276499.1, LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule homolog [Rhipicephalus microplus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q64487Receptor-type tyrosine-protein phosphatase delta OS=Mus musculus OX=10090 GN=Ptprd PE=1 SV=3
G5EF96Netrin receptor unc-40 OS=Caenorhabditis elegans OX=6239 GN=unc-40 PE=1 SV=1
P23468Receptor-type tyrosine-protein phosphatase delta OS=Homo sapiens OX=9606 GN=PTPRD PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF01170UPF0020Putative RNA methylase family UPF0020DomainInterproscan
PF02926THUMPTHUMP domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF00856SETSET domainFamilyInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF13936HTH_38Helix-turn-helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR000241DomainRibosomal RNA large subunit methyltransferase K/L-like, methyltransferase domainInterproscan
IPR004114DomainTHUMP domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR001214DomainSET domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR043550FamilyHistone-lysine N-methyltransferase EHMT1/EHMT2Interproscan
IPR023780DomainChromo domainInterproscan
IPR023779Conserved_siteChromo domain, conserved siteInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR051053FamilyEnoyl-CoA hydratase/isomerase and chromodomain-containing proteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR025246DomainTransposase IS30-like HTH domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR14911THUMP DOMAIN-CONTAININGInterproscan
PTHR44170PROTEIN SIDEKICKInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan
PTHR46307G9A, ISOFORM BInterproscan
PTHR43684-Interproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016423Molecular FunctiontRNA (guanine) methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0002039Molecular Functionp53 bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006306Biological Processobsolete DNA methylationInterproscan
GO:0016279Molecular Functionprotein-lysine N-methyltransferase activityInterproscan
GO:0018027Biological Processpeptidyl-lysine dimethylationInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan
GO:0046974Molecular Functionhistone H3K9 methyltransferase activityInterproscan
GO:0051570Biological Processobsolete regulation of histone H3-K9 methylationInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07483K07483; transposase-Antimicrobial resistance genesko01504deepkoala
Replication and repair-deepkoala

TOP