Detailed information of Aala_g1399.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4039622.1, zinc finger MYM-type 1-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2AVA0Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus OX=10090 GN=Svep1 PE=1 SV=1
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
P0CF97Protein FAM200B OS=Homo sapiens OX=9606 GN=FAM200B PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF18149Helicase_PWIN-terminal helicase PWI domainDomainInterproscan
PF10256Erf4Golgin subfamily A member 7/ERF4 familyDomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019382FamilyTranslation initiation factor 3 complex subunit LInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR041094DomainBrr2, N-terminal helicase PWI domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR053134FamilyRNA-directed DNA polymerase homologInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR019383DomainGolgin subfamily A member 7/ERF4Interproscan
IPR051371FamilyRas-specific palmitoyltransferase complexInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13242EUKARYOTIC TRANSLATION INITIATION FACTOR 3Interproscan
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24124ANKYRIN REPEAT FAMILY AInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINInterproscan
PTHR13254GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A, 7Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005852Cellular Componenteukaryotic translation initiation factor 3 complexInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0002178Cellular Componentpalmitoyltransferase complexInterproscan
GO:0006612Biological Processprotein targeting to membraneInterproscan
GO:0018230Biological Processpeptidyl-L-cysteine S-palmitoylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25777GOLGA7, GCP16; golgin subfamily A member 7-Membrane traffickingko04131deepkoala

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