Gene detail

Detailed information of Aala_g1405.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047133155.1, chromodomain-helicase-DNA-binding protein 8 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P42026	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS7 PE=1 SV=1
Q9DC70	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs7 PE=1 SV=1
Q0MQH9	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS7 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	THAP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan
PF13359	DDE_Tnp_4	DDE superfamily endonuclease	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF01058	Oxidored_q6	NADH ubiquinone oxidoreductase, 20 Kd subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR027806	Domain	Harbinger transposase-derived nuclease domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR006138	Family	NADH-ubiquinone oxidoreductase, 20 Kd subunit	Interproscan
IPR006137	Domain	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23080	THAP DOMAIN PROTEIN	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR46104	GENE 9195-RELATED-RELATED	Interproscan
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR11995	NADH DEHYDROGENASE	Interproscan
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0008137	Molecular Function	NADH dehydrogenase (ubiquinone) activity	Interproscan
GO:0048038	Molecular Function	quinone binding	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0009060	Biological Process	aerobic respiration	Interproscan
GO:0015990	Biological Process	electron transport coupled proton transport	Interproscan
GO:0045272	Cellular Component	obsolete plasma membrane respiratory chain complex I	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10878	SPO11; meiotic recombination protein SPO11	-	Chromosome and associated proteins	ko03036	deepkoala