Detailed information of Aala_g1414.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_019642753.1, PREDICTED: cytoplasmic dynein 1 heavy chain 1-like [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JHU4Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2
P38650Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1
Q14204Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC1H1 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF08385DHC_N1Dynein heavy chain, N-terminal region 1FamilyInterproscan
PF04146YTHYT521-B-like domainDomainInterproscan
PF01534FrizzledFrizzled/Smoothened family membrane regionFamilyInterproscan
PF01392FzFz domainDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR053164FamilyIS1016-like transposaseInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR013594DomainDynein heavy chain, tailInterproscan
IPR045168FamilyYTH domain containing proteinInterproscan
IPR007275DomainYTH domainInterproscan
IPR020067DomainFrizzled domainInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR000539DomainFrizzled/Smoothened, 7TMInterproscan
IPR015526FamilyFrizzled/secreted frizzled-related proteinInterproscan
IPR047105DomainFrizzled-4/Mom-5, 7TMInterproscan
IPR036790Homologous_superfamilyFrizzled cysteine-rich domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47163DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEINInterproscan
PTHR46532MALE FERTILITY FACTOR KL5Interproscan
PTHR12357YTH YT521-B HOMOLOGY DOMAIN-CONTAININGInterproscan
PTHR11309FRIZZLEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45749-Interproscan
PTHR33064POL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005858Cellular Componentaxonemal dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0048024Biological Processregulation of mRNA splicing, via spliceosomeInterproscan
GO:1990247Molecular FunctionN6-methyladenosine-containing RNA reader activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0017147Molecular FunctionWnt-protein bindingInterproscan
GO:0035567Biological Processnon-canonical Wnt signaling pathwayInterproscan
GO:0042813Molecular FunctionWnt receptor activityInterproscan
GO:0060070Biological Processcanonical Wnt signaling pathwayInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02354FZD4, fz4, CD344; frizzled 4-Spliceosomeko03041deepkoala
CD moleculesko04090deepkoala

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