Detailed information of Aala_g1429.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3993571.1, Hypothetical predicted protein, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01057Parvo_NS1Parvovirus non-structural protein NS1DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13465zf-H2C2_2Zinc-finger double domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR014015DomainHelicase, superfamily 3, DNA virusInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001257DomainParvovirus non-structural protein 1, helicase domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45615MYOSIN HEAVY CHAIN, NON-MUSCLEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR24203ANKYRIN REPEAT FAMILY PROTEINInterproscan
PTHR14003TRANSCRIPTIONAL REPRESSOR PROTEIN YYInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR45749-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000146Molecular Functionmicrofilament motor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016460Cellular Componentmyosin II complexInterproscan
GO:0032982Cellular Componentmyosin filamentInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0019079Biological Processviral genome replicationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0031519Cellular ComponentPcG protein complexInterproscan

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