Detailed information of Aala_g1435.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAF7243767.1, Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Varanus komodoensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F4JJJ3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB3 PE=2 SV=1
Q94BV7External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB2 PE=1 SV=1
Q07500External NADH-ubiquinone oxidoreductase 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NDE2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan
PF00808CBFD_NFYB_HMFHistone-like transcription factor (CBF/NF-Y) and archaeal histoneDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000164FamilyHistone H3/CENP-AInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR023753DomainFAD/NAD(P)-binding domainInterproscan
IPR045024FamilyAlternative NADH dehydrogenaseInterproscan
IPR051377FamilyDNA Polymerase Epsilon SubunitInterproscan
IPR003958DomainTranscription factor CBF/NF-Y/archaeal histone domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR052094FamilyPre-mRNA-splicing and ERAD-associated proteinInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR014767DomainDiaphanous autoregulatory (DAD) domainInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11426HISTONE H3Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43706NADH DEHYDROGENASEInterproscan
PTHR46172DNA POLYMERASE EPSILON SUBUNIT 3Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR33064POL PROTEINInterproscan
PTHR44313DNAJ HOMOLOG SUBFAMILY C MEMBER 17Interproscan
PTHR24178MOLTING PROTEIN MLT-4Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003954Molecular FunctionNADH dehydrogenase activityInterproscan
GO:0006116Biological ProcessNADH oxidationInterproscan
GO:0006272Biological Processleading strand elongationInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0008622Cellular Componentepsilon DNA polymerase complexInterproscan
GO:0008623Cellular ComponentCHRACInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0031507Biological Processheterochromatin formationInterproscan
GO:0000390Biological Processspliceosomal complex disassemblyInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0097543Cellular Componentciliary inversin compartmentInterproscan
GO:1904108Biological Processprotein localization to ciliary inversin compartmentInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02326POLE3; DNA polymerase epsilon subunit 3EC:2.7.7.7
Function unknown-deepkoala
Exosomeko04147deepkoala
Energy metabolism-deepkoala
DNA repair and recombination proteinsko03400deepkoala

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