Detailed information of Aala_g1445.t1 in Alatina alata

Genomic Location: :...
NR annotation: AOF43140.1, histone macroH2A [Hydractinia echinata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35061Histone H2A OS=Acropora formosa OX=126732 PE=3 SV=2
P13630Histone H2A OS=Paracentrotus lividus OX=7656 PE=3 SV=2
P16866Histone H2A-IV OS=Volvox carteri OX=3067 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF08447PAS_3PAS foldDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF18199Dynein_CDynein heavy chain C-terminal domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF01633Choline_kinaseCholine/ethanolamine kinaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR002119FamilyHistone H2AInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR013655DomainPAS fold-3Interproscan
IPR001610RepeatPAC motifInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR000014DomainPAS domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041228DomainDynein heavy chain, C-terminal domainInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR043160Homologous_superfamilyDynein heavy chain, C-terminal domain, barrel regionInterproscan
IPR000998DomainMAM domainInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR23430HISTONE H2AInterproscan
PTHR23043HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46961DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan
PTHR22603CHOLINE/ETHANOALAMINE KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004305Molecular Functionethanolamine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006646Biological Processphosphatidylethanolamine biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09098NPAS1_3; neuronal PAS domain-containing protein 1/3-Transcription factorsko03000deepkoala

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