Detailed information of Aala_g1449.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB3980586.1, E3 ubiquitin- ligase TRIM71-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3ZVM4E3 ubiquitin-protein ligase TRIM71 OS=Rattus norvegicus OX=10116 GN=Trim71 PE=3 SV=1
Q1PSW8E3 ubiquitin-protein ligase TRIM71 OS=Mus musculus OX=10090 GN=Trim71 PE=1 SV=1
E1BJS7E3 ubiquitin-protein ligase TRIM71 OS=Bos taurus OX=9913 GN=TRIM71 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00113Enolase_CEnolase, C-terminal TIM barrel domainDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF01436NHLNHL repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036079Homologous_superfamilyV-type ATP synthase subunit c/d subunit superfamilyInterproscan
IPR016727FamilyATPase, V0 complex, subunit dInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR036849Homologous_superfamilyEnolase-like, C-terminal domain superfamilyInterproscan
IPR000941FamilyEnolaseInterproscan
IPR020810DomainEnolase, C-terminal TIM barrel domainInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR11028VACUOLAR ATP SYNTHASE SUBUNIT AC39Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR34222GAG_PRE-INTEGRS DOMAIN-CONTAINING PROTEINInterproscan
PTHR11902ENOLASEInterproscan
PTHR10680PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0007034Biological Processvacuolar transportInterproscan
GO:0007035Biological Processvacuolar acidificationInterproscan
GO:0016471Cellular Componentvacuolar proton-transporting V-type ATPase complexInterproscan
GO:0033179Cellular Componentproton-transporting V-type ATPase, V0 domainInterproscan
GO:0033181Cellular Componentplasma membrane proton-transporting V-type ATPase complexInterproscan
GO:0046961Molecular Functionproton-transporting ATPase activity, rotational mechanismInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000015Cellular Componentphosphopyruvate hydratase complexInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0004634Molecular Functionphosphopyruvate hydratase activityInterproscan
GO:0006096Biological Processglycolytic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan

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