Detailed information of Aala_g1454.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_012554359.2, N-acetylneuraminate 9-O-acetyltransferase [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96AY4Tetratricopeptide repeat protein 28 OS=Homo sapiens OX=9606 GN=TTC28 PE=1 SV=4
Q80XJ3Tetratricopeptide repeat protein 28 OS=Mus musculus OX=10090 GN=Ttc28 PE=1 SV=3
Q90YB1DNA ligase 4 OS=Gallus gallus OX=9031 GN=LIG4 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12770CHATCHAT domainDomainInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04112Mak10Mak10 subunit, NatC N(alpha)-terminal acetyltransferaseFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR029710FamilyDNA ligase 4Interproscan
IPR026103FamilyHarbinger transposase-derived nuclease, animalInterproscan
IPR024983DomainCHAT domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR051476FamilyBacterial Response Regulator Aspartate PhosphataseInterproscan
IPR050327FamilyProton-linked Monocarboxylate TransporterInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR007244Family-alpha-acetyltransferase 35, NatC auxiliary subunitInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45997DNA LIGASE 4Interproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR46630TETRATRICOPEPTIDE REPEAT PROTEIN 29Interproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11360MONOCARBOXYLATE TRANSPORTERInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005958Cellular ComponentDNA-dependent protein kinase-DNA ligase 4 complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0032807Cellular ComponentDNA ligase IV complexInterproscan
GO:0051103Biological ProcessDNA ligation involved in DNA repairInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003341Biological Processcilium movementInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0008028Molecular Functionmonocarboxylic acid transmembrane transporter activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0017196Biological ProcessN-terminal peptidyl-methionine acetylationInterproscan
GO:0031417Cellular ComponentNatC complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26155CYREN, MRI; cell cycle regulator of non-homologous end joining-Ion channelsko04040deepkoala
DNA repair and recombination proteinsko03400deepkoala

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