Gene detail

Detailed information of Aala_g1475.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI8500755.1, hypothetical protein Bbelb_215730 [Branchiostoma belcheri]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q10126	Putative uncharacterized transposon-derived protein F52C9.6 OS=Caenorhabditis elegans OX=6239 GN=F52C9.6 PE=5 SV=1
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P11369	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13359	DDE_Tnp_4	DDE superfamily endonuclease	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027806	Domain	Harbinger transposase-derived nuclease domain	Interproscan
IPR026103	Family	Harbinger transposase-derived nuclease, animal	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR039539	Family	Ras GTPase-activating protein-binding protein	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR052510	Family	Oomycete RxLR Effector	Interproscan
IPR004244	Family	Transposase, L1	Interproscan
IPR029006	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR014010	Domain	REJ domain	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22930	UNCHARACTERIZED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR10693	RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN	Interproscan
PTHR45895	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR11505	L1 TRANSPOSABLE ELEMENT-RELATED	Interproscan
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003727	Molecular Function	single-stranded RNA binding	Interproscan
GO:0032197	Biological Process	retrotransposition	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02956	RP-S15, MRPS15, rpsO; small subunit ribosomal protein S15	-	Chromosome and associated proteins	ko03036	deepkoala
K02956	RP-S15, MRPS15, rpsO; small subunit ribosomal protein S15	-	Ribosome	ko03011	deepkoala