Detailed information of Aala_g1480.t1 in Alatina alata

Genomic Location: :...
NR annotation: PFX12096.1, Retrovirus-related Pol polyprotein [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P16219Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=ACADS PE=1 SV=1
Q5RAS0Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii OX=9601 GN=ACADS PE=2 SV=1
P79273Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa OX=9823 GN=ACADS PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00441Acyl-CoA_dh_1Acyl-CoA dehydrogenase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR053080FamilyProtein phosphatase 1 regulatory subunit 27Interproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036250Homologous_superfamilyAcyl-CoA dehydrogenase-like, C-terminalInterproscan
IPR006089Conserved_siteAcyl-CoA dehydrogenase, conserved siteInterproscan
IPR009075DomainAcyl-CoA dehydrogenase/oxidase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR46899PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 27Interproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR43884ACYL-COA DEHYDROGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003995Molecular Functionacyl-CoA dehydrogenase activityInterproscan
GO:0004085Molecular Functionobsolete butyryl-CoA dehydrogenase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0033539Biological Processfatty acid beta-oxidation using acyl-CoA dehydrogenaseInterproscan
GO:0046359Biological Processbutyrate catabolic processInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan

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